PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00294g00813.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family MYB_related
Protein Properties Length: 825aa    MW: 91539.8 Da    PI: 4.8017
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00294g00813.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.62.8e-085784129
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIar 29
                              r rW++eE++++++a k++G   W++I +
  Peaxi162Scf00294g00813.1 57 RERWSEEEHKKFLEALKLHGRA-WRRIEE 84
                              78******************88.***965 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.57E-65185IPR009057Homeodomain-like
PfamPF002491.3E-55784IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.2E-45785IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 825 aa     Download sequence    Send to blast
MAIRDESDSE TMLPSRDMIS PDVGAPSPRS ILLEEQVSPA DEYAPKIRKA YTITKQRERW  60
SEEEHKKFLE ALKLHGRAWR RIEEALINFQ SMWAPKLQFR FEAMPRISHI FYDSKRRAVF  120
IKTQSVSYWH QLMLNVVRET NNGEVSSVKS IEIPPPRPKR KPMHPYPRKL TIPVDEKAKS  180
SDSLNLSHSE TENQSPTSVL SALGSDALGR ADSSKQSESS SPVSSAVAEN SGDLLHAKPS  240
DFMLEQRKSS PAQAYASSIS DNQACVKLEF FTEDNDYVKE YPVEASSTQH LKLFGQTVLI  300
TDSHISSSST SSMEFSPQES ECAPSPSTIG APAPFYYVSG PNGSPRPNES VSSSFLPWGS  360
SYASAAFSCT HVHNPIPTKG RAFFDDKESD DKETQKEGSS TGSNGESVSA ELSGDRNMEI  420
EAQSSRSLVE EAGGRKLHSL FQRRANFKRV KGFVPYKRCL AERGISSSTL TGEEREEPRT  480
QLCLLPLTFT ISVVCFTKIE PSQAEIHNFE LPVFKPYNIG PNGPNKLLRA DLSGLKVYLA  540
NCFEKIYKKL DIDPDDIGDT NGCNGVSENN HVPDDERIHD NINQTSERVD PQQDHQQQKT  600
FAYQCYEVNE DPHGIDMEFG RGLDAVVLSD ATELAEEHVR IHNNEAVISE DVLEDLQVDK  660
DFNINLMEAV NIQDEGISAQ VPPVEADGHQ IGIDDPIHAC PVSVEGHVLH KDAGNRFDVP  720
IADTVGNQMG NVETINALPL KLDAAVLHKV ESINIHDIPT DAVDKDMGNL DPVPRTSSLA  780
GDDIGNEFGN VDPLSQLRES QWHDLTARAA EVVKERVEMR AKEAE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004231624.11e-178PREDICTED: protein REVEILLE 1
TrEMBLK4B5T01e-178K4B5T0_SOLLC; Uncharacterized protein
STRINGSolyc02g036370.2.11e-177(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31852447
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17300.11e-27MYB_related family protein